Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.77■□□□□ 0.76
Fam196aQ3USH1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Fam196aQ3USH1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.77■□□□□ 0.75
Fam196aQ3USH1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam196aQ3USH1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Gm15565-201ENSMUST00000118890 427 ntBASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Fam196aQ3USH1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fam196aQ3USH1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Fam196aQ3USH1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam196aQ3USH1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fam196aQ3USH1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Fam196aQ3USH1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fam196aQ3USH1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fam196aQ3USH1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Fam196aQ3USH1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.67■□□□□ 0.74
Fam196aQ3USH1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Fam196aQ3USH1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms