Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc190Q3URK1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc190Q3URK1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc190Q3URK1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc190Q3URK1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc190Q3URK1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc190Q3URK1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc190Q3URK1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc190Q3URK1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc190Q3URK1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc190Q3URK1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms