Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Gm14117-201ENSMUST00000122417 843 ntBASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shisa3Q3UPR0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shisa3Q3UPR0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Gm10399-202ENSMUST00000202768 748 ntBASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shisa3Q3UPR0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shisa3Q3UPR0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Gm40881-201ENSMUST00000223397 166 ntBASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa3Q3UPR0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa3Q3UPR0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa3Q3UPR0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa3Q3UPR0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Gm7417-201ENSMUST00000192950 473 ntBASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.79■□□□□ 0.28
Shisa3Q3UPR0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shisa3Q3UPR0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms