Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Gm10655-201ENSMUST00000098658 1397 ntBASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC29.27■■■□□ 2.28
Arhgef40Q3UPH7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
Arhgef40Q3UPH7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Arhgef40Q3UPH7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Arhgef40Q3UPH7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Gm22240-201ENSMUST00000175225 82 ntBASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Gm6420-201ENSMUST00000193885 723 ntBASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Arhgef40Q3UPH7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Arhgef40Q3UPH7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Arhgef40Q3UPH7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Gm37035-201ENSMUST00000194809 2148 ntBASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Arhgef40Q3UPH7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Arhgef40Q3UPH7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Arhgef40Q3UPH7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Arhgef40Q3UPH7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Arhgef40Q3UPH7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC29.21■■■□□ 2.27
Arhgef40Q3UPH7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC29.2■■■□□ 2.27
Arhgef40Q3UPH7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Arhgef40Q3UPH7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Arhgef40Q3UPH7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Arhgef40Q3UPH7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
Arhgef40Q3UPH7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Arhgef40Q3UPH7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 Snhg20-203ENSMUST00000182811 2153 ntBASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 AA386476-201ENSMUST00000098781 1665 ntBASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC29.18■■■□□ 2.26
Arhgef40Q3UPH7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Gm6211-202ENSMUST00000167849 925 ntBASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Gm15043-201ENSMUST00000118843 1543 ntBASIC29.17■■■□□ 2.26
Arhgef40Q3UPH7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Gm17641-201ENSMUST00000166328 2350 ntBASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Arhgef40Q3UPH7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Gm8520-201ENSMUST00000186517 868 ntBASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Gm26524-201ENSMUST00000192339 390 ntBASIC29.15■■■□□ 2.26
Arhgef40Q3UPH7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Arhgef40Q3UPH7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC29.14■■■□□ 2.25
Arhgef40Q3UPH7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Arhgef40Q3UPH7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC29.14■■■□□ 2.25
Arhgef40Q3UPH7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
Arhgef40Q3UPH7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC29.13■■■□□ 2.25
Arhgef40Q3UPH7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC29.13■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms