Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1brtQ3UNC9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Cks1brtQ3UNC9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cks1brtQ3UNC9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.14□□□□□ -0.15
Cks1brtQ3UNC9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cks1brtQ3UNC9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cks1brtQ3UNC9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Mir3960-201ENSMUST00000198213 73 ntBASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cks1brtQ3UNC9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cks1brtQ3UNC9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1brtQ3UNC9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms