Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Spg11Q3UHA3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Spg11Q3UHA3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Spg11Q3UHA3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg11Q3UHA3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg11Q3UHA3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.33■□□□□ 0.53
Spg11Q3UHA3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Spg11Q3UHA3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Spg11Q3UHA3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Spg11Q3UHA3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg11Q3UHA3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg11Q3UHA3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Spg11Q3UHA3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Spg11Q3UHA3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Spg11Q3UHA3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Spg11Q3UHA3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Spg11Q3UHA3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Ank2-226ENSMUST00000189368 339 ntBASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Spg11Q3UHA3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Spg11Q3UHA3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms