Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Limch1Q3UH68 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.02■■□□□ 1.27
Limch1Q3UH68 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.01■■□□□ 1.27
Limch1Q3UH68 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Limch1Q3UH68 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Limch1Q3UH68 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
Limch1Q3UH68 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23■■□□□ 1.27
Limch1Q3UH68 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23■■□□□ 1.27
Limch1Q3UH68 Gm43759-201ENSMUST00000196925 1261 ntBASIC23■■□□□ 1.27
Limch1Q3UH68 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23■■□□□ 1.27
Limch1Q3UH68 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Limch1Q3UH68 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Limch1Q3UH68 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Limch1Q3UH68 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23■■□□□ 1.27
Limch1Q3UH68 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Limch1Q3UH68 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.98■■□□□ 1.27
Limch1Q3UH68 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Limch1Q3UH68 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Limch1Q3UH68 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Limch1Q3UH68 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Limch1Q3UH68 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Limch1Q3UH68 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Limch1Q3UH68 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Gm43173-201ENSMUST00000202246 593 ntBASIC22.95■■□□□ 1.26
Limch1Q3UH68 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Limch1Q3UH68 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Limch1Q3UH68 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Limch1Q3UH68 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.92■■□□□ 1.26
Limch1Q3UH68 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.92■■□□□ 1.26
Limch1Q3UH68 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Limch1Q3UH68 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Limch1Q3UH68 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.92■■□□□ 1.26
Limch1Q3UH68 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Limch1Q3UH68 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Gm12251-201ENSMUST00000117893 792 ntBASIC22.91■■□□□ 1.26
Limch1Q3UH68 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms