Protein–RNA interactions for Protein: Q3TS39

1700066B19Rik, RIKEN cDNA 1700066B19 gene, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700066B19RikQ3TS39 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
1700066B19RikQ3TS39 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
1700066B19RikQ3TS39 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
1700066B19RikQ3TS39 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.18■□□□□ 0.5
1700066B19RikQ3TS39 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
1700066B19RikQ3TS39 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Gm12251-201ENSMUST00000117893 792 ntBASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
1700066B19RikQ3TS39 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
1700066B19RikQ3TS39 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
1700066B19RikQ3TS39 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
1700066B19RikQ3TS39 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
1700066B19RikQ3TS39 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Mir7075-201ENSMUST00000184187 82 ntBASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
1700066B19RikQ3TS39 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.12■□□□□ 0.49
1700066B19RikQ3TS39 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Gm27454-201ENSMUST00000185090 204 ntBASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.11■□□□□ 0.49
1700066B19RikQ3TS39 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
1700066B19RikQ3TS39 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
1700066B19RikQ3TS39 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
1700066B19RikQ3TS39 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms