Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nhej1Q3KNJ2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhej1Q3KNJ2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nhej1Q3KNJ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhej1Q3KNJ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhej1Q3KNJ2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhej1Q3KNJ2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nhej1Q3KNJ2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nhej1Q3KNJ2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.77■□□□□ 0.91
Nhej1Q3KNJ2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Nhej1Q3KNJ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhej1Q3KNJ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhej1Q3KNJ2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhej1Q3KNJ2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nhej1Q3KNJ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nhej1Q3KNJ2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nhej1Q3KNJ2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nhej1Q3KNJ2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nhej1Q3KNJ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nhej1Q3KNJ2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nhej1Q3KNJ2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms