Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.57■□□□□ 0.4
Pkd1l3Q2EG98 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Gm13234-201ENSMUST00000120010 747 ntBASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pkd1l3Q2EG98 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pkd1l3Q2EG98 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkd1l3Q2EG98 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkd1l3Q2EG98 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkd1l3Q2EG98 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Gm18671-201ENSMUST00000214826 683 ntBASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pkd1l3Q2EG98 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pkd1l3Q2EG98 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkd1l3Q2EG98 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkd1l3Q2EG98 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkd1l3Q2EG98 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.5■□□□□ 0.39
Pkd1l3Q2EG98 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkd1l3Q2EG98 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms