Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf1Q07802 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf1Q07802 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ebf1Q07802 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ebf1Q07802 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf1Q07802 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.76
Ebf1Q07802 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.77■□□□□ 0.76
Ebf1Q07802 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.77■□□□□ 0.76
Ebf1Q07802 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf1Q07802 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf1Q07802 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ebf1Q07802 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ebf1Q07802 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.76■□□□□ 0.75
Ebf1Q07802 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf1Q07802 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.76■□□□□ 0.75
Ebf1Q07802 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf1Q07802 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf1Q07802 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf1Q07802 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.76■□□□□ 0.75
Ebf1Q07802 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf1Q07802 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf1Q07802 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf1Q07802 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ebf1Q07802 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.75■□□□□ 0.75
Ebf1Q07802 Gm13234-201ENSMUST00000120010 747 ntBASIC19.75■□□□□ 0.75
Ebf1Q07802 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.75■□□□□ 0.75
Ebf1Q07802 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.75■□□□□ 0.75
Ebf1Q07802 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf1Q07802 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf1Q07802 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Ebf1Q07802 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.73■□□□□ 0.75
Ebf1Q07802 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ebf1Q07802 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ebf1Q07802 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf1Q07802 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.72■□□□□ 0.75
Ebf1Q07802 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ebf1Q07802 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ebf1Q07802 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ebf1Q07802 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf1Q07802 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf1Q07802 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ebf1Q07802 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf1Q07802 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ebf1Q07802 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Ebf1Q07802 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.71■□□□□ 0.75
Ebf1Q07802 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf1Q07802 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf1Q07802 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf1Q07802 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.7■□□□□ 0.74
Ebf1Q07802 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ebf1Q07802 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ebf1Q07802 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf1Q07802 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.7■□□□□ 0.74
Ebf1Q07802 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf1Q07802 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf1Q07802 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf1Q07802 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Gm27801-201ENSMUST00000184174 223 ntBASIC19.69■□□□□ 0.74
Ebf1Q07802 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf1Q07802 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ebf1Q07802 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.68■□□□□ 0.74
Ebf1Q07802 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Ebf1Q07802 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms