Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox8Q04886 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox8Q04886 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Sox8Q04886 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sox8Q04886 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox8Q04886 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox8Q04886 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox8Q04886 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox8Q04886 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox8Q04886 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.7■□□□□ 0.9
Sox8Q04886 Gm26571-201ENSMUST00000181399 666 ntBASIC20.7■□□□□ 0.9
Sox8Q04886 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
Sox8Q04886 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.7■□□□□ 0.9
Sox8Q04886 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.7■□□□□ 0.9
Sox8Q04886 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.7■□□□□ 0.9
Sox8Q04886 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sox8Q04886 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox8Q04886 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.69■□□□□ 0.9
Sox8Q04886 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox8Q04886 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox8Q04886 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox8Q04886 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox8Q04886 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox8Q04886 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.68■□□□□ 0.9
Sox8Q04886 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sox8Q04886 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 Gm27801-201ENSMUST00000184174 223 ntBASIC20.68■□□□□ 0.9
Sox8Q04886 Gm42642-201ENSMUST00000200683 355 ntBASIC20.68■□□□□ 0.9
Sox8Q04886 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox8Q04886 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sox8Q04886 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Sox8Q04886 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox8Q04886 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox8Q04886 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox8Q04886 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sox8Q04886 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox8Q04886 Gm9988-201ENSMUST00000069786 435 ntBASIC20.67■□□□□ 0.9
Sox8Q04886 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Sox8Q04886 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox8Q04886 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sox8Q04886 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.66■□□□□ 0.9
Sox8Q04886 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.66■□□□□ 0.9
Sox8Q04886 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sox8Q04886 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sox8Q04886 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox8Q04886 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sox8Q04886 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sox8Q04886 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox8Q04886 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox8Q04886 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox8Q04886 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.65■□□□□ 0.9
Sox8Q04886 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.65■□□□□ 0.9
Sox8Q04886 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox8Q04886 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Sox8Q04886 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sox8Q04886 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox8Q04886 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox8Q04886 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox8Q04886 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox8Q04886 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox8Q04886 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox8Q04886 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sox8Q04886 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sox8Q04886 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sox8Q04886 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.63■□□□□ 0.89
Sox8Q04886 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.63■□□□□ 0.89
Sox8Q04886 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.63■□□□□ 0.89
Sox8Q04886 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox8Q04886 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.63■□□□□ 0.89
Sox8Q04886 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms