Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Gm11643-201ENSMUST00000119578 864 ntBASIC19.78■□□□□ 0.76
Smad4P97471 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad4P97471 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad4P97471 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smad4P97471 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smad4P97471 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smad4P97471 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.77■□□□□ 0.76
Smad4P97471 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.77■□□□□ 0.76
Smad4P97471 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.77■□□□□ 0.76
Smad4P97471 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smad4P97471 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Smad4P97471 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smad4P97471 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad4P97471 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad4P97471 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad4P97471 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smad4P97471 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.76■□□□□ 0.75
Smad4P97471 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Smad4P97471 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.76■□□□□ 0.75
Smad4P97471 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Smad4P97471 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smad4P97471 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad4P97471 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smad4P97471 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.75■□□□□ 0.75
Smad4P97471 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.75■□□□□ 0.75
Smad4P97471 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad4P97471 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad4P97471 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smad4P97471 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smad4P97471 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.74■□□□□ 0.75
Smad4P97471 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Gm15565-201ENSMUST00000118890 427 ntBASIC19.74■□□□□ 0.75
Smad4P97471 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smad4P97471 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smad4P97471 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smad4P97471 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Smad4P97471 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.73■□□□□ 0.75
Smad4P97471 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.73■□□□□ 0.75
Smad4P97471 Gm2559-201ENSMUST00000201323 363 ntBASIC19.73■□□□□ 0.75
Smad4P97471 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Smad4P97471 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smad4P97471 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.72■□□□□ 0.75
Smad4P97471 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smad4P97471 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.72■□□□□ 0.75
Smad4P97471 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smad4P97471 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.72■□□□□ 0.75
Smad4P97471 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad4P97471 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
Smad4P97471 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.71■□□□□ 0.75
Smad4P97471 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smad4P97471 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smad4P97471 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smad4P97471 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smad4P97471 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.7■□□□□ 0.74
Smad4P97471 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smad4P97471 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smad4P97471 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad4P97471 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms