Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PrkdcP97313 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PrkdcP97313 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PrkdcP97313 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PrkdcP97313 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.22
PrkdcP97313 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PrkdcP97313 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.7□□□□□ -0.22
PrkdcP97313 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Gm10698-201ENSMUST00000182663 604 ntBASIC13.7□□□□□ -0.22
PrkdcP97313 Gm43799-201ENSMUST00000201845 579 ntBASIC13.7□□□□□ -0.22
PrkdcP97313 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.7□□□□□ -0.22
PrkdcP97313 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PrkdcP97313 Rab3c-203ENSMUST00000224180 967 ntBASIC13.7□□□□□ -0.22
PrkdcP97313 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PrkdcP97313 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PrkdcP97313 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.7□□□□□ -0.22
PrkdcP97313 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.69□□□□□ -0.22
PrkdcP97313 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.69□□□□□ -0.22
PrkdcP97313 Gm10231-201ENSMUST00000181584 441 ntBASIC13.69□□□□□ -0.22
PrkdcP97313 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Gm10517-202ENSMUST00000192970 758 ntBASIC13.69□□□□□ -0.22
PrkdcP97313 Gm10175-202ENSMUST00000208752 441 ntBASIC13.69□□□□□ -0.22
PrkdcP97313 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PrkdcP97313 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.68□□□□□ -0.22
PrkdcP97313 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.68□□□□□ -0.22
PrkdcP97313 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.68□□□□□ -0.22
PrkdcP97313 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PrkdcP97313 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.67□□□□□ -0.22
PrkdcP97313 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PrkdcP97313 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
PrkdcP97313 Gm42418-201ENSMUST00000182010 1831 ntBASIC13.67□□□□□ -0.22
PrkdcP97313 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.67□□□□□ -0.22
PrkdcP97313 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PrkdcP97313 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.66□□□□□ -0.22
PrkdcP97313 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PrkdcP97313 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
PrkdcP97313 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PrkdcP97313 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
PrkdcP97313 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.66□□□□□ -0.22
PrkdcP97313 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.66□□□□□ -0.22
PrkdcP97313 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.66□□□□□ -0.22
PrkdcP97313 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PrkdcP97313 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PrkdcP97313 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 Dio3-201ENSMUST00000097228 1449 ntBASIC13.65□□□□□ -0.22
PrkdcP97313 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.65□□□□□ -0.22
PrkdcP97313 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PrkdcP97313 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PrkdcP97313 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PrkdcP97313 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PrkdcP97313 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PrkdcP97313 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PrkdcP97313 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms