Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.09■□□□□ 0.33
Sec61a1P61620 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Gm12922-201ENSMUST00000120626 809 ntBASIC17.09■□□□□ 0.33
Sec61a1P61620 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.09■□□□□ 0.33
Sec61a1P61620 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Sec61a1P61620 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sec61a1P61620 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Sec61a1P61620 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sec61a1P61620 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sec61a1P61620 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Sec61a1P61620 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a1P61620 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a1P61620 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sec61a1P61620 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Sec61a1P61620 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a1P61620 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sec61a1P61620 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sec61a1P61620 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sec61a1P61620 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sec61a1P61620 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
Sec61a1P61620 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sec61a1P61620 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sec61a1P61620 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.06■□□□□ 0.32
Sec61a1P61620 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.06■□□□□ 0.32
Sec61a1P61620 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sec61a1P61620 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.05■□□□□ 0.32
Sec61a1P61620 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.05■□□□□ 0.32
Sec61a1P61620 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Gm15039-201ENSMUST00000118914 875 ntBASIC17.05■□□□□ 0.32
Sec61a1P61620 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sec61a1P61620 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.05■□□□□ 0.32
Sec61a1P61620 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.05■□□□□ 0.32
Sec61a1P61620 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.05■□□□□ 0.32
Sec61a1P61620 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.05■□□□□ 0.32
Sec61a1P61620 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Sec61a1P61620 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sec61a1P61620 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sec61a1P61620 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sec61a1P61620 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.04■□□□□ 0.32
Sec61a1P61620 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.04■□□□□ 0.32
Sec61a1P61620 Golgb1-201ENSMUST00000023534 498 ntBASIC17.04■□□□□ 0.32
Sec61a1P61620 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sec61a1P61620 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sec61a1P61620 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sec61a1P61620 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sec61a1P61620 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms