Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox3P53784 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
Sox3P53784 Nespas-201ENSMUST00000143738 1083 ntBASIC18.64■□□□□ 0.57
Sox3P53784 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Sox3P53784 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.64■□□□□ 0.57
Sox3P53784 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.64■□□□□ 0.57
Sox3P53784 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox3P53784 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.64■□□□□ 0.57
Sox3P53784 Gm7143-201ENSMUST00000222811 859 ntBASIC18.64■□□□□ 0.57
Sox3P53784 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Sox3P53784 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox3P53784 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox3P53784 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.64■□□□□ 0.57
Sox3P53784 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox3P53784 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox3P53784 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sox3P53784 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox3P53784 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox3P53784 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox3P53784 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sox3P53784 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox3P53784 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox3P53784 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox3P53784 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox3P53784 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox3P53784 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox3P53784 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Smad6-203ENSMUST00000179458 273 ntBASIC18.61■□□□□ 0.57
Sox3P53784 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.61■□□□□ 0.57
Sox3P53784 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox3P53784 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox3P53784 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox3P53784 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sox3P53784 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.61■□□□□ 0.57
Sox3P53784 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox3P53784 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sox3P53784 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox3P53784 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Sox3P53784 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Sox3P53784 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sox3P53784 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sox3P53784 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Sox3P53784 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.59■□□□□ 0.57
Sox3P53784 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Sox3P53784 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Gm22325-201ENSMUST00000158904 308 ntBASIC18.59■□□□□ 0.57
Sox3P53784 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.59■□□□□ 0.57
Sox3P53784 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.59■□□□□ 0.57
Sox3P53784 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.59■□□□□ 0.57
Sox3P53784 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sox3P53784 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox3P53784 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sox3P53784 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox3P53784 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sox3P53784 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox3P53784 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms