Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Hmga2P52927 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hmga2P52927 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hmga2P52927 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmga2P52927 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.63■□□□□ 0.25
Hmga2P52927 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmga2P52927 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmga2P52927 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmga2P52927 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmga2P52927 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.62■□□□□ 0.25
Hmga2P52927 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Hmga2P52927 Gm43530-201ENSMUST00000195920 274 ntBASIC16.62■□□□□ 0.25
Hmga2P52927 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Hmga2P52927 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmga2P52927 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hmga2P52927 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.61■□□□□ 0.25
Hmga2P52927 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hmga2P52927 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmga2P52927 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.6■□□□□ 0.25
Hmga2P52927 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.6■□□□□ 0.25
Hmga2P52927 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmga2P52927 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hmga2P52927 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.59■□□□□ 0.25
Hmga2P52927 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.59■□□□□ 0.25
Hmga2P52927 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.59■□□□□ 0.25
Hmga2P52927 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.59■□□□□ 0.25
Hmga2P52927 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hmga2P52927 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmga2P52927 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Hmga2P52927 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Hmga2P52927 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Hmga2P52927 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmga2P52927 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmga2P52927 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.58■□□□□ 0.25
Hmga2P52927 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmga2P52927 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmga2P52927 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmga2P52927 AA386476-201ENSMUST00000098781 1665 ntBASIC16.58■□□□□ 0.24
Hmga2P52927 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmga2P52927 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmga2P52927 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Hmga2P52927 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hmga2P52927 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Hmga2P52927 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hmga2P52927 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Gm10232-201ENSMUST00000089221 720 ntBASIC16.57■□□□□ 0.24
Hmga2P52927 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmga2P52927 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms