Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn3P51791 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Clcn3P51791 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.34■■□□□ 1.01
Clcn3P51791 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Clcn3P51791 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Clcn3P51791 AA386476-201ENSMUST00000098781 1665 ntBASIC21.34■■□□□ 1.01
Clcn3P51791 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Clcn3P51791 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn3P51791 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn3P51791 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn3P51791 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn3P51791 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Clcn3P51791 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.33■■□□□ 1.01
Clcn3P51791 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.33■■□□□ 1.01
Clcn3P51791 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Clcn3P51791 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Clcn3P51791 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Clcn3P51791 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn3P51791 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn3P51791 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Clcn3P51791 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.32■■□□□ 1
Clcn3P51791 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn3P51791 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.32■■□□□ 1
Clcn3P51791 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Clcn3P51791 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Clcn3P51791 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn3P51791 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn3P51791 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.31■■□□□ 1
Clcn3P51791 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Clcn3P51791 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn3P51791 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Clcn3P51791 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.3■■□□□ 1
Clcn3P51791 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Clcn3P51791 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.3■■□□□ 1
Clcn3P51791 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.3■■□□□ 1
Clcn3P51791 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Clcn3P51791 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.3■■□□□ 1
Clcn3P51791 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Clcn3P51791 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn3P51791 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.29■■□□□ 1
Clcn3P51791 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.29■■□□□ 1
Clcn3P51791 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Clcn3P51791 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.29■■□□□ 1
Clcn3P51791 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.29■■□□□ 1
Clcn3P51791 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.29■■□□□ 1
Clcn3P51791 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clcn3P51791 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.29■■□□□ 1
Clcn3P51791 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.29■■□□□ 1
Clcn3P51791 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.28■■□□□ 1
Clcn3P51791 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Clcn3P51791 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.28■■□□□ 1
Clcn3P51791 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.28■■□□□ 1
Clcn3P51791 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Clcn3P51791 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Clcn3P51791 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.28■■□□□ 1
Clcn3P51791 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clcn3P51791 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Clcn3P51791 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.26■□□□□ 0.99
Clcn3P51791 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.26■□□□□ 0.99
Clcn3P51791 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Clcn3P51791 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Clcn3P51791 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clcn3P51791 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Clcn3P51791 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Clcn3P51791 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Clcn3P51791 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clcn3P51791 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.25■□□□□ 0.99
Clcn3P51791 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms