Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Gli1P47806 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.98■□□□□ 0.63
Gli1P47806 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.98■□□□□ 0.63
Gli1P47806 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gli1P47806 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gli1P47806 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.97■□□□□ 0.63
Gli1P47806 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Gli1P47806 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.97■□□□□ 0.63
Gli1P47806 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gli1P47806 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gli1P47806 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Gli1P47806 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gli1P47806 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Gli1P47806 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gli1P47806 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Gli1P47806 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gli1P47806 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gli1P47806 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.94■□□□□ 0.62
Gli1P47806 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gli1P47806 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Gli1P47806 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.94■□□□□ 0.62
Gli1P47806 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli1P47806 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli1P47806 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.93■□□□□ 0.62
Gli1P47806 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.93■□□□□ 0.62
Gli1P47806 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gli1P47806 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gli1P47806 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.93■□□□□ 0.62
Gli1P47806 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gli1P47806 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Gli1P47806 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.92■□□□□ 0.62
Gli1P47806 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Gli1P47806 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gli1P47806 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gli1P47806 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gli1P47806 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Gli1P47806 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.91■□□□□ 0.62
Gli1P47806 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gli1P47806 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.9■□□□□ 0.62
Gli1P47806 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Gm8495-201ENSMUST00000188740 694 ntBASIC18.9■□□□□ 0.62
Gli1P47806 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Gli1P47806 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gli1P47806 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gli1P47806 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms