Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.78■□□□□ 0.6
Rph3aP47708 Spcs1-204ENSMUST00000226782 949 ntBASIC18.78■□□□□ 0.6
Rph3aP47708 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.78■□□□□ 0.6
Rph3aP47708 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rph3aP47708 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rph3aP47708 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rph3aP47708 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rph3aP47708 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rph3aP47708 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rph3aP47708 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.77■□□□□ 0.6
Rph3aP47708 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rph3aP47708 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.76■□□□□ 0.59
Rph3aP47708 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rph3aP47708 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rph3aP47708 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rph3aP47708 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rph3aP47708 Mir7075-201ENSMUST00000184187 82 ntBASIC18.75■□□□□ 0.59
Rph3aP47708 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.75■□□□□ 0.59
Rph3aP47708 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rph3aP47708 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rph3aP47708 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Rph3aP47708 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.75■□□□□ 0.59
Rph3aP47708 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Rph3aP47708 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Rph3aP47708 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.74■□□□□ 0.59
Rph3aP47708 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.74■□□□□ 0.59
Rph3aP47708 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rph3aP47708 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rph3aP47708 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rph3aP47708 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.73■□□□□ 0.59
Rph3aP47708 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Rph3aP47708 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.73■□□□□ 0.59
Rph3aP47708 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rph3aP47708 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rph3aP47708 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.72■□□□□ 0.59
Rph3aP47708 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rph3aP47708 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rph3aP47708 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rph3aP47708 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.71■□□□□ 0.59
Rph3aP47708 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Gm12251-201ENSMUST00000117893 792 ntBASIC18.71■□□□□ 0.59
Rph3aP47708 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rph3aP47708 Gm45417-201ENSMUST00000209533 758 ntBASIC18.71■□□□□ 0.59
Rph3aP47708 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.71■□□□□ 0.59
Rph3aP47708 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.71■□□□□ 0.59
Rph3aP47708 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.71■□□□□ 0.59
Rph3aP47708 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rph3aP47708 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.7■□□□□ 0.58
Rph3aP47708 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rph3aP47708 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rph3aP47708 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms