Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Nkx2-6P43688 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Gm13234-201ENSMUST00000120010 747 ntBASIC18.49■□□□□ 0.55
Nkx2-6P43688 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.49■□□□□ 0.55
Nkx2-6P43688 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Nkx2-6P43688 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Gm12933-201ENSMUST00000120203 872 ntBASIC18.48■□□□□ 0.55
Nkx2-6P43688 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-6P43688 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-6P43688 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.46■□□□□ 0.55
Nkx2-6P43688 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-6P43688 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-6P43688 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nkx2-6P43688 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-6P43688 Gm9988-201ENSMUST00000069786 435 ntBASIC18.44■□□□□ 0.54
Nkx2-6P43688 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkx2-6P43688 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-6P43688 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-6P43688 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx2-6P43688 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx2-6P43688 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.41■□□□□ 0.54
Nkx2-6P43688 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.41■□□□□ 0.54
Nkx2-6P43688 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx2-6P43688 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms