Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Abca1P41233 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Abca1P41233 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Gm13234-201ENSMUST00000120010 747 ntBASIC16.14■□□□□ 0.17
Abca1P41233 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Abca1P41233 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca1P41233 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.13■□□□□ 0.17
Abca1P41233 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca1P41233 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.12■□□□□ 0.17
Abca1P41233 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.12■□□□□ 0.17
Abca1P41233 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.12■□□□□ 0.17
Abca1P41233 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.12■□□□□ 0.17
Abca1P41233 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca1P41233 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.12■□□□□ 0.17
Abca1P41233 Gm27801-201ENSMUST00000184174 223 ntBASIC16.12■□□□□ 0.17
Abca1P41233 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.11■□□□□ 0.17
Abca1P41233 Gm12441-201ENSMUST00000121806 588 ntBASIC16.11■□□□□ 0.17
Abca1P41233 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.11■□□□□ 0.17
Abca1P41233 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.11■□□□□ 0.17
Abca1P41233 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.11■□□□□ 0.17
Abca1P41233 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Gm9988-201ENSMUST00000069786 435 ntBASIC16.11■□□□□ 0.17
Abca1P41233 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca1P41233 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Abca1P41233 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Abca1P41233 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Abca1P41233 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.1■□□□□ 0.17
Abca1P41233 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Abca1P41233 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca1P41233 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Gm4968-201ENSMUST00000071458 858 ntBASIC16.09■□□□□ 0.17
Abca1P41233 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Abca1P41233 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Abca1P41233 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca1P41233 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Abca1P41233 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.08■□□□□ 0.17
Abca1P41233 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Abca1P41233 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Abca1P41233 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Abca1P41233 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.08■□□□□ 0.17
Abca1P41233 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Abca1P41233 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Abca1P41233 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Abca1P41233 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Abca1P41233 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.08■□□□□ 0.16
Abca1P41233 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca1P41233 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms