Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.68■□□□□ 0.58
Cdh4P39038 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdh4P39038 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh4P39038 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh4P39038 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh4P39038 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdh4P39038 Gm26833-201ENSMUST00000180899 440 ntBASIC18.67■□□□□ 0.58
Cdh4P39038 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.67■□□□□ 0.58
Cdh4P39038 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.67■□□□□ 0.58
Cdh4P39038 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh4P39038 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh4P39038 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cdh4P39038 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.67■□□□□ 0.58
Cdh4P39038 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdh4P39038 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Cdh4P39038 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.66■□□□□ 0.58
Cdh4P39038 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh4P39038 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh4P39038 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdh4P39038 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh4P39038 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh4P39038 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdh4P39038 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdh4P39038 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdh4P39038 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cdh4P39038 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.64■□□□□ 0.57
Cdh4P39038 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cdh4P39038 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.64■□□□□ 0.57
Cdh4P39038 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh4P39038 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdh4P39038 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdh4P39038 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdh4P39038 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh4P39038 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Gm11421-201ENSMUST00000122124 294 ntBASIC18.62■□□□□ 0.57
Cdh4P39038 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.62■□□□□ 0.57
Cdh4P39038 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.62■□□□□ 0.57
Cdh4P39038 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdh4P39038 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdh4P39038 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh4P39038 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdh4P39038 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdh4P39038 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Cdh4P39038 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cdh4P39038 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh4P39038 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cdh4P39038 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cdh4P39038 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdh4P39038 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.6■□□□□ 0.57
Cdh4P39038 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh4P39038 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms