Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.4■□□□□ 0.7
LdlrP35951 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LdlrP35951 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LdlrP35951 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LdlrP35951 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LdlrP35951 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
LdlrP35951 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
LdlrP35951 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.38■□□□□ 0.69
LdlrP35951 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LdlrP35951 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LdlrP35951 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.37■□□□□ 0.69
LdlrP35951 Mir6236-201ENSMUST00000184437 123 ntBASIC19.37■□□□□ 0.69
LdlrP35951 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.37■□□□□ 0.69
LdlrP35951 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.37■□□□□ 0.69
LdlrP35951 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LdlrP35951 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LdlrP35951 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LdlrP35951 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LdlrP35951 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.36■□□□□ 0.69
LdlrP35951 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LdlrP35951 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LdlrP35951 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.36■□□□□ 0.69
LdlrP35951 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.36■□□□□ 0.69
LdlrP35951 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LdlrP35951 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LdlrP35951 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.36■□□□□ 0.69
LdlrP35951 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
LdlrP35951 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LdlrP35951 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.34■□□□□ 0.69
LdlrP35951 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LdlrP35951 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LdlrP35951 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LdlrP35951 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.34■□□□□ 0.69
LdlrP35951 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LdlrP35951 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LdlrP35951 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LdlrP35951 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LdlrP35951 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.33■□□□□ 0.68
LdlrP35951 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.33■□□□□ 0.68
LdlrP35951 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LdlrP35951 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LdlrP35951 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LdlrP35951 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LdlrP35951 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LdlrP35951 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LdlrP35951 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LdlrP35951 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LdlrP35951 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LdlrP35951 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.32■□□□□ 0.68
LdlrP35951 Golph3-205ENSMUST00000228671 2842 ntBASIC19.32■□□□□ 0.68
LdlrP35951 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LdlrP35951 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LdlrP35951 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LdlrP35951 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms