Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.96■□□□□ 0.79
Mmp13P33435 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.96■□□□□ 0.79
Mmp13P33435 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Mmp13P33435 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mmp13P33435 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.95■□□□□ 0.78
Mmp13P33435 Gm21956-201ENSMUST00000179946 522 ntBASIC19.95■□□□□ 0.78
Mmp13P33435 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Mmp13P33435 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Mmp13P33435 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Mmp13P33435 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mmp13P33435 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp13P33435 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mmp13P33435 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.94■□□□□ 0.78
Mmp13P33435 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.94■□□□□ 0.78
Mmp13P33435 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.94■□□□□ 0.78
Mmp13P33435 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Mmp13P33435 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Mmp13P33435 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp13P33435 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Mmp13P33435 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.93■□□□□ 0.78
Mmp13P33435 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Mmp13P33435 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp13P33435 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Mmp13P33435 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp13P33435 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp13P33435 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp13P33435 Mir6236-201ENSMUST00000184437 123 ntBASIC19.92■□□□□ 0.78
Mmp13P33435 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp13P33435 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp13P33435 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
Mmp13P33435 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Mmp13P33435 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Mmp13P33435 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp13P33435 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.9■□□□□ 0.78
Mmp13P33435 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.9■□□□□ 0.78
Mmp13P33435 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.9■□□□□ 0.78
Mmp13P33435 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp13P33435 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Mmp13P33435 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Mmp13P33435 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp13P33435 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Mmp13P33435 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Mmp13P33435 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp13P33435 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp13P33435 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp13P33435 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.88■□□□□ 0.77
Mmp13P33435 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Mmp13P33435 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp13P33435 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Mmp13P33435 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp13P33435 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.88■□□□□ 0.77
Mmp13P33435 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp13P33435 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Mmp13P33435 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Mmp13P33435 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp13P33435 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp13P33435 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms