Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Gm13238-201ENSMUST00000117655 780 ntBASIC16.75■□□□□ 0.27
Slc6a1P31648 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc6a1P31648 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc6a1P31648 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc6a1P31648 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc6a1P31648 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc6a1P31648 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc6a1P31648 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Slc6a1P31648 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc6a1P31648 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.73■□□□□ 0.27
Slc6a1P31648 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Slc6a1P31648 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Gm15820-201ENSMUST00000201566 728 ntBASIC16.73■□□□□ 0.27
Slc6a1P31648 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
Slc6a1P31648 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Slc6a1P31648 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc6a1P31648 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc6a1P31648 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Slc6a1P31648 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc6a1P31648 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.72■□□□□ 0.27
Slc6a1P31648 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Slc6a1P31648 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.72■□□□□ 0.27
Slc6a1P31648 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc6a1P31648 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.72■□□□□ 0.27
Slc6a1P31648 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Slc6a1P31648 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc6a1P31648 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.71■□□□□ 0.27
Slc6a1P31648 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc6a1P31648 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Slc6a1P31648 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Slc6a1P31648 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.71■□□□□ 0.27
Slc6a1P31648 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a1P31648 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Slc6a1P31648 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a1P31648 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a1P31648 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.7■□□□□ 0.26
Slc6a1P31648 Gm10232-201ENSMUST00000089221 720 ntBASIC16.7■□□□□ 0.26
Slc6a1P31648 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a1P31648 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a1P31648 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.69■□□□□ 0.26
Slc6a1P31648 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc6a1P31648 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Rps24-207ENSMUST00000224568 714 ntBASIC16.69■□□□□ 0.26
Slc6a1P31648 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a1P31648 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms