Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp3P28862 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp3P28862 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Mmp3P28862 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.06■□□□□ 0.96
Mmp3P28862 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.06■□□□□ 0.96
Mmp3P28862 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp3P28862 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Mmp3P28862 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp3P28862 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp3P28862 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Mmp3P28862 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.05■□□□□ 0.96
Mmp3P28862 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp3P28862 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp3P28862 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp3P28862 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp3P28862 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp3P28862 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp3P28862 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp3P28862 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Mmp3P28862 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp3P28862 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.03■□□□□ 0.96
Mmp3P28862 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mmp3P28862 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Mmp3P28862 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp3P28862 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp3P28862 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.02■□□□□ 0.96
Mmp3P28862 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mmp3P28862 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.02■□□□□ 0.96
Mmp3P28862 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.02■□□□□ 0.96
Mmp3P28862 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.02■□□□□ 0.96
Mmp3P28862 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.02■□□□□ 0.96
Mmp3P28862 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp3P28862 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Mmp3P28862 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mmp3P28862 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.01■□□□□ 0.95
Mmp3P28862 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp3P28862 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp3P28862 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Mmp3P28862 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp3P28862 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp3P28862 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp3P28862 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Mmp3P28862 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Mmp3P28862 Gm7514-201ENSMUST00000209475 934 ntBASIC21■□□□□ 0.95
Mmp3P28862 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Mmp3P28862 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mmp3P28862 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp3P28862 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mmp3P28862 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Mmp3P28862 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Mmp3P28862 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Gm38205-201ENSMUST00000192243 258 ntBASIC20.98■□□□□ 0.95
Mmp3P28862 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp3P28862 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mmp3P28862 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp3P28862 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Mmp3P28862 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.96■□□□□ 0.95
Mmp3P28862 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp3P28862 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp3P28862 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.96■□□□□ 0.95
Mmp3P28862 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp3P28862 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Mmp3P28862 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp3P28862 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
Mmp3P28862 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.95■□□□□ 0.95
Mmp3P28862 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Mmp3P28862 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Mmp3P28862 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp3P28862 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms