Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gja4P28235 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.74
Gja4P28235 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gja4P28235 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Gja4P28235 Gm12441-201ENSMUST00000121806 588 ntBASIC19.64■□□□□ 0.73
Gja4P28235 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.64■□□□□ 0.73
Gja4P28235 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.64■□□□□ 0.73
Gja4P28235 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.64■□□□□ 0.73
Gja4P28235 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.64■□□□□ 0.73
Gja4P28235 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gja4P28235 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Gja4P28235 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gja4P28235 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Gja4P28235 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Gja4P28235 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.63■□□□□ 0.73
Gja4P28235 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gja4P28235 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 AA386476-201ENSMUST00000098781 1665 ntBASIC19.62■□□□□ 0.73
Gja4P28235 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Gja4P28235 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Gja4P28235 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gja4P28235 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gja4P28235 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.62■□□□□ 0.73
Gja4P28235 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gja4P28235 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
Gja4P28235 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gja4P28235 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gja4P28235 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.61■□□□□ 0.73
Gja4P28235 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gja4P28235 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gja4P28235 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.61■□□□□ 0.73
Gja4P28235 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gja4P28235 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gja4P28235 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.61■□□□□ 0.73
Gja4P28235 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gja4P28235 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.6■□□□□ 0.73
Gja4P28235 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gja4P28235 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gja4P28235 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gja4P28235 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gja4P28235 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.59■□□□□ 0.73
Gja4P28235 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.59■□□□□ 0.73
Gja4P28235 Gm4968-201ENSMUST00000071458 858 ntBASIC19.59■□□□□ 0.73
Gja4P28235 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gja4P28235 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Gja4P28235 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gja4P28235 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gja4P28235 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gja4P28235 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Gja4P28235 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gja4P28235 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gja4P28235 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.57■□□□□ 0.72
Gja4P28235 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Gja4P28235 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gja4P28235 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.57■□□□□ 0.72
Gja4P28235 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gja4P28235 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gja4P28235 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gja4P28235 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Gja4P28235 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.56■□□□□ 0.72
Gja4P28235 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Gja4P28235 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gja4P28235 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.56■□□□□ 0.72
Gja4P28235 Gm6420-201ENSMUST00000193885 723 ntBASIC19.56■□□□□ 0.72
Gja4P28235 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms