Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxb9P20615 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxb9P20615 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.8■□□□□ 0.6
Hoxb9P20615 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hoxb9P20615 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxb9P20615 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxb9P20615 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb9P20615 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb9P20615 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb9P20615 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.79■□□□□ 0.6
Hoxb9P20615 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.79■□□□□ 0.6
Hoxb9P20615 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hoxb9P20615 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb9P20615 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Gm27454-201ENSMUST00000185090 204 ntBASIC18.78■□□□□ 0.6
Hoxb9P20615 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.78■□□□□ 0.6
Hoxb9P20615 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb9P20615 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb9P20615 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Hoxb9P20615 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Hoxb9P20615 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxb9P20615 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb9P20615 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hoxb9P20615 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hoxb9P20615 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 Gm43173-201ENSMUST00000202246 593 ntBASIC18.75■□□□□ 0.59
Hoxb9P20615 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.75■□□□□ 0.59
Hoxb9P20615 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb9P20615 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.74■□□□□ 0.59
Hoxb9P20615 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.74■□□□□ 0.59
Hoxb9P20615 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxb9P20615 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hoxb9P20615 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.74■□□□□ 0.59
Hoxb9P20615 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb9P20615 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Hoxb9P20615 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb9P20615 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb9P20615 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb9P20615 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb9P20615 Gm12821-201ENSMUST00000120022 600 ntBASIC18.73■□□□□ 0.59
Hoxb9P20615 Mir7075-201ENSMUST00000184187 82 ntBASIC18.73■□□□□ 0.59
Hoxb9P20615 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hoxb9P20615 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hoxb9P20615 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hoxb9P20615 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hoxb9P20615 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxb9P20615 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.72■□□□□ 0.59
Hoxb9P20615 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.72■□□□□ 0.59
Hoxb9P20615 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb9P20615 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hoxb9P20615 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hoxb9P20615 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.71■□□□□ 0.59
Hoxb9P20615 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.71■□□□□ 0.59
Hoxb9P20615 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxb9P20615 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms