Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm10033-202ENSMUST00000211874 928 ntBASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf9P20334 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Gm10602-201ENSMUST00000098239 609 ntBASIC15.75■□□□□ 0.11
Tnfrsf9P20334 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.74■□□□□ 0.11
Tnfrsf9P20334 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf9P20334 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Smad6-203ENSMUST00000179458 273 ntBASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf9P20334 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm43530-201ENSMUST00000195920 274 ntBASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf9P20334 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf9P20334 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tnfrsf9P20334 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Tnfrsf9P20334 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tnfrsf9P20334 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf9P20334 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms