Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P20040 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
P20040 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.27■□□□□ 0.36
P20040 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P20040 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
P20040 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.27■□□□□ 0.36
P20040 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.27■□□□□ 0.36
P20040 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.27■□□□□ 0.36
P20040 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P20040 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.27■□□□□ 0.35
P20040 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
P20040 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P20040 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P20040 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P20040 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.26■□□□□ 0.35
P20040 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
P20040 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P20040 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
P20040 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
P20040 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
P20040 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P20040 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P20040 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.24■□□□□ 0.35
P20040 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P20040 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
P20040 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
P20040 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P20040 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.22■□□□□ 0.35
P20040 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.22■□□□□ 0.35
P20040 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.22■□□□□ 0.35
P20040 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.22■□□□□ 0.35
P20040 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P20040 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.22■□□□□ 0.35
P20040 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P20040 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
P20040 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.21■□□□□ 0.35
P20040 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.21■□□□□ 0.35
P20040 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.21■□□□□ 0.35
P20040 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
P20040 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P20040 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P20040 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P20040 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P20040 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P20040 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
P20040 Gm12821-201ENSMUST00000120022 600 ntBASIC17.2■□□□□ 0.34
P20040 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms