Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.76■□□□□ 0.59
Cntn1P12960 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.76■□□□□ 0.59
Cntn1P12960 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cntn1P12960 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Cntn1P12960 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.75■□□□□ 0.59
Cntn1P12960 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Cntn1P12960 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Cntn1P12960 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntn1P12960 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.75■□□□□ 0.59
Cntn1P12960 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.74■□□□□ 0.59
Cntn1P12960 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cntn1P12960 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cntn1P12960 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cntn1P12960 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.74■□□□□ 0.59
Cntn1P12960 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.74■□□□□ 0.59
Cntn1P12960 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntn1P12960 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cntn1P12960 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.73■□□□□ 0.59
Cntn1P12960 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.73■□□□□ 0.59
Cntn1P12960 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.73■□□□□ 0.59
Cntn1P12960 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.73■□□□□ 0.59
Cntn1P12960 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cntn1P12960 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cntn1P12960 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.72■□□□□ 0.59
Cntn1P12960 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.72■□□□□ 0.59
Cntn1P12960 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.72■□□□□ 0.59
Cntn1P12960 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cntn1P12960 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntn1P12960 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.72■□□□□ 0.59
Cntn1P12960 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.71■□□□□ 0.59
Cntn1P12960 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cntn1P12960 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntn1P12960 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntn1P12960 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntn1P12960 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Cntn1P12960 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.7■□□□□ 0.58
Cntn1P12960 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.7■□□□□ 0.58
Cntn1P12960 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntn1P12960 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.7■□□□□ 0.58
Cntn1P12960 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.69■□□□□ 0.58
Cntn1P12960 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Cntn1P12960 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntn1P12960 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cntn1P12960 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cntn1P12960 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntn1P12960 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntn1P12960 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cntn1P12960 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cntn1P12960 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.68■□□□□ 0.58
Cntn1P12960 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms