Protein–RNA interactions for Protein: P0C1Z5

Putative UPF0730 protein encoded by LINC00643 homolog, mousemouse

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P0C1Z5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
P0C1Z5 Gm15820-201ENSMUST00000201566 728 ntBASIC15.09■□□□□ 0.01
P0C1Z5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
P0C1Z5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P0C1Z5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P0C1Z5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P0C1Z5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.09■□□□□ 0.01
P0C1Z5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P0C1Z5 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.09■□□□□ 0.01
P0C1Z5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
P0C1Z5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
P0C1Z5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.08■□□□□ 0.01
P0C1Z5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
P0C1Z5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
P0C1Z5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.08■□□□□ 0
P0C1Z5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
P0C1Z5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
P0C1Z5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.08■□□□□ 0
P0C1Z5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P0C1Z5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.07■□□□□ 0
P0C1Z5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P0C1Z5 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.07■□□□□ 0
P0C1Z5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.07■□□□□ 0
P0C1Z5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P0C1Z5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
P0C1Z5 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.07■□□□□ 0
P0C1Z5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P0C1Z5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.06■□□□□ 0
P0C1Z5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P0C1Z5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.06■□□□□ 0
P0C1Z5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P0C1Z5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
P0C1Z5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
P0C1Z5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
P0C1Z5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
P0C1Z5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.05■□□□□ -0
P0C1Z5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.05■□□□□ -0
P0C1Z5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
P0C1Z5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
P0C1Z5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
P0C1Z5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.04■□□□□ -0
P0C1Z5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
P0C1Z5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.04■□□□□ -0
P0C1Z5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
P0C1Z5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.04■□□□□ -0
P0C1Z5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
P0C1Z5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.03■□□□□ -0
P0C1Z5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.03■□□□□ -0
P0C1Z5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
P0C1Z5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Gm5812-201ENSMUST00000061073 957 ntBASIC15.03■□□□□ -0
P0C1Z5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.03■□□□□ -0
P0C1Z5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
P0C1Z5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P0C1Z5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P0C1Z5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
P0C1Z5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
P0C1Z5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms