Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.22■□□□□ 0.83
Syn1O88935 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.22■□□□□ 0.83
Syn1O88935 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.22■□□□□ 0.83
Syn1O88935 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.21■□□□□ 0.83
Syn1O88935 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.21■□□□□ 0.83
Syn1O88935 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.21■□□□□ 0.83
Syn1O88935 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syn1O88935 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Syn1O88935 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Syn1O88935 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.2■□□□□ 0.82
Syn1O88935 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Syn1O88935 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syn1O88935 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Gm6576-201ENSMUST00000169678 883 ntBASIC20.19■□□□□ 0.82
Syn1O88935 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syn1O88935 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Syn1O88935 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.18■□□□□ 0.82
Syn1O88935 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.18■□□□□ 0.82
Syn1O88935 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Syn1O88935 Mir6236-201ENSMUST00000184437 123 ntBASIC20.18■□□□□ 0.82
Syn1O88935 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syn1O88935 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Syn1O88935 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Syn1O88935 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Syn1O88935 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Syn1O88935 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Syn1O88935 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.16■□□□□ 0.82
Syn1O88935 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.16■□□□□ 0.82
Syn1O88935 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.16■□□□□ 0.82
Syn1O88935 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Syn1O88935 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Gm13146-201ENSMUST00000118508 780 ntBASIC20.15■□□□□ 0.82
Syn1O88935 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Syn1O88935 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.15■□□□□ 0.82
Syn1O88935 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.15■□□□□ 0.82
Syn1O88935 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.15■□□□□ 0.82
Syn1O88935 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Syn1O88935 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Syn1O88935 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Syn1O88935 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.14■□□□□ 0.81
Syn1O88935 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.14■□□□□ 0.81
Syn1O88935 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Syn1O88935 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Syn1O88935 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Syn1O88935 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Syn1O88935 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syn1O88935 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Syn1O88935 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Syn1O88935 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms