Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.89■□□□□ 0.61
Best1O88870 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Best1O88870 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Best1O88870 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Best1O88870 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Best1O88870 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Best1O88870 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Best1O88870 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.88■□□□□ 0.61
Best1O88870 Gm7291-201ENSMUST00000199147 382 ntBASIC18.88■□□□□ 0.61
Best1O88870 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.88■□□□□ 0.61
Best1O88870 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Reep4-203ENSMUST00000226563 1444 ntBASIC18.88■□□□□ 0.61
Best1O88870 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Best1O88870 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Best1O88870 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.87■□□□□ 0.61
Best1O88870 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.87■□□□□ 0.61
Best1O88870 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Best1O88870 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Best1O88870 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Best1O88870 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.87■□□□□ 0.61
Best1O88870 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Best1O88870 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Best1O88870 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.86■□□□□ 0.61
Best1O88870 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.86■□□□□ 0.61
Best1O88870 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Best1O88870 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Best1O88870 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Best1O88870 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Best1O88870 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
Best1O88870 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Best1O88870 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.85■□□□□ 0.61
Best1O88870 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.85■□□□□ 0.61
Best1O88870 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Best1O88870 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Best1O88870 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Best1O88870 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Best1O88870 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Best1O88870 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Best1O88870 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Best1O88870 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.84■□□□□ 0.61
Best1O88870 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.84■□□□□ 0.61
Best1O88870 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Best1O88870 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Best1O88870 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Best1O88870 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Best1O88870 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Best1O88870 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Best1O88870 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Best1O88870 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Best1O88870 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Best1O88870 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Best1O88870 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Best1O88870 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Best1O88870 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Best1O88870 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Best1O88870 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Best1O88870 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Best1O88870 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.82■□□□□ 0.6
Best1O88870 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Best1O88870 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Best1O88870 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Best1O88870 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Best1O88870 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Best1O88870 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.81■□□□□ 0.6
Best1O88870 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
Best1O88870 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Best1O88870 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Best1O88870 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms