Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.68■□□□□ 0.58
Hcn3O88705 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hcn3O88705 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.68■□□□□ 0.58
Hcn3O88705 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.68■□□□□ 0.58
Hcn3O88705 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hcn3O88705 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hcn3O88705 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.67■□□□□ 0.58
Hcn3O88705 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hcn3O88705 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.67■□□□□ 0.58
Hcn3O88705 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn3O88705 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.66■□□□□ 0.58
Hcn3O88705 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.66■□□□□ 0.58
Hcn3O88705 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn3O88705 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.65■□□□□ 0.58
Hcn3O88705 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.65■□□□□ 0.58
Hcn3O88705 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hcn3O88705 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn3O88705 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hcn3O88705 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hcn3O88705 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn3O88705 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.63■□□□□ 0.57
Hcn3O88705 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hcn3O88705 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.63■□□□□ 0.57
Hcn3O88705 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.63■□□□□ 0.57
Hcn3O88705 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Hcn3O88705 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.63■□□□□ 0.57
Hcn3O88705 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn3O88705 Grk6-206ENSMUST00000224995 2971 ntBASIC18.63■□□□□ 0.57
Hcn3O88705 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.62■□□□□ 0.57
Hcn3O88705 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hcn3O88705 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.62■□□□□ 0.57
Hcn3O88705 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn3O88705 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.61■□□□□ 0.57
Hcn3O88705 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcn3O88705 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcn3O88705 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Hcn3O88705 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.6■□□□□ 0.57
Hcn3O88705 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms