Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ClppO88696 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ClppO88696 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
ClppO88696 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ClppO88696 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
ClppO88696 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ClppO88696 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.95■□□□□ 0.62
ClppO88696 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.95■□□□□ 0.62
ClppO88696 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.95■□□□□ 0.62
ClppO88696 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClppO88696 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.94■□□□□ 0.62
ClppO88696 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Mir6236-201ENSMUST00000184437 123 ntBASIC18.94■□□□□ 0.62
ClppO88696 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.94■□□□□ 0.62
ClppO88696 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ClppO88696 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ClppO88696 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClppO88696 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClppO88696 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClppO88696 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ClppO88696 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.93■□□□□ 0.62
ClppO88696 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.92■□□□□ 0.62
ClppO88696 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.92■□□□□ 0.62
ClppO88696 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.92■□□□□ 0.62
ClppO88696 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.92■□□□□ 0.62
ClppO88696 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ClppO88696 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.92■□□□□ 0.62
ClppO88696 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClppO88696 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.91■□□□□ 0.62
ClppO88696 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ClppO88696 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
ClppO88696 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.91■□□□□ 0.62
ClppO88696 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ClppO88696 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClppO88696 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ClppO88696 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClppO88696 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ClppO88696 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClppO88696 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ClppO88696 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ClppO88696 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ClppO88696 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.89■□□□□ 0.61
ClppO88696 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
ClppO88696 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
ClppO88696 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ClppO88696 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClppO88696 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ClppO88696 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ClppO88696 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms