Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 Gm10232-201ENSMUST00000089221 720 ntBASIC17.98■□□□□ 0.47
Cops4O88544 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops4O88544 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cops4O88544 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.97■□□□□ 0.47
Cops4O88544 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.97■□□□□ 0.47
Cops4O88544 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.97■□□□□ 0.47
Cops4O88544 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cops4O88544 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops4O88544 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cops4O88544 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops4O88544 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cops4O88544 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops4O88544 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cops4O88544 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops4O88544 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cops4O88544 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops4O88544 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.96■□□□□ 0.47
Cops4O88544 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.96■□□□□ 0.47
Cops4O88544 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cops4O88544 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cops4O88544 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops4O88544 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cops4O88544 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 Gm10399-202ENSMUST00000202768 748 ntBASIC17.95■□□□□ 0.46
Cops4O88544 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.95■□□□□ 0.46
Cops4O88544 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops4O88544 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops4O88544 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops4O88544 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Cops4O88544 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cops4O88544 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cops4O88544 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.94■□□□□ 0.46
Cops4O88544 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cops4O88544 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cops4O88544 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cops4O88544 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cops4O88544 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cops4O88544 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops4O88544 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.93■□□□□ 0.46
Cops4O88544 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cops4O88544 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cops4O88544 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops4O88544 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cops4O88544 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.92■□□□□ 0.46
Cops4O88544 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.92■□□□□ 0.46
Cops4O88544 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops4O88544 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops4O88544 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops4O88544 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.92■□□□□ 0.46
Cops4O88544 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops4O88544 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cops4O88544 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cops4O88544 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.91■□□□□ 0.46
Cops4O88544 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.91■□□□□ 0.46
Cops4O88544 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.91■□□□□ 0.46
Cops4O88544 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.91■□□□□ 0.46
Cops4O88544 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops4O88544 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms