Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Gm11643-201ENSMUST00000119578 864 ntBASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 Gm5643-201ENSMUST00000117081 966 ntBASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Gm15565-201ENSMUST00000118890 427 ntBASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Gm38205-201ENSMUST00000192243 258 ntBASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf17O88472 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf17O88472 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf17O88472 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf17O88472 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf17O88472 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Gm13534-201ENSMUST00000121169 513 ntBASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Rab3c-203ENSMUST00000224180 967 ntBASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf17O88472 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tnfrsf17O88472 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf17O88472 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf17O88472 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf17O88472 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf17O88472 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf17O88472 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Gm12896-201ENSMUST00000118430 226 ntBASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms