Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Gm2559-201ENSMUST00000201323 363 ntBASIC19.32■□□□□ 0.68
Cacna1hO88427 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1hO88427 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1hO88427 Gm10517-202ENSMUST00000192970 758 ntBASIC19.31■□□□□ 0.68
Cacna1hO88427 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacna1hO88427 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.3■□□□□ 0.68
Cacna1hO88427 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cacna1hO88427 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1hO88427 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cacna1hO88427 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Gm10698-201ENSMUST00000182663 604 ntBASIC19.29■□□□□ 0.68
Cacna1hO88427 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1hO88427 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.29■□□□□ 0.68
Cacna1hO88427 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1hO88427 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
Cacna1hO88427 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gm6659-201ENSMUST00000174752 547 ntBASIC19.28■□□□□ 0.68
Cacna1hO88427 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.28■□□□□ 0.68
Cacna1hO88427 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.28■□□□□ 0.68
Cacna1hO88427 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cacna1hO88427 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1hO88427 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1hO88427 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1hO88427 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1hO88427 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cacna1hO88427 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1hO88427 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1hO88427 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.27■□□□□ 0.67
Cacna1hO88427 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Cacna1hO88427 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1hO88427 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.26■□□□□ 0.67
Cacna1hO88427 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1hO88427 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1hO88427 Gm15378-201ENSMUST00000121894 207 ntBASIC19.26■□□□□ 0.67
Cacna1hO88427 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.26■□□□□ 0.67
Cacna1hO88427 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Cacna1hO88427 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1hO88427 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1hO88427 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1hO88427 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1hO88427 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.25■□□□□ 0.67
Cacna1hO88427 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1hO88427 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1hO88427 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1hO88427 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.24■□□□□ 0.67
Cacna1hO88427 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1hO88427 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1hO88427 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1hO88427 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.23■□□□□ 0.67
Cacna1hO88427 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Cacna1hO88427 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1hO88427 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1hO88427 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1hO88427 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cacna1hO88427 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1hO88427 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.22■□□□□ 0.67
Cacna1hO88427 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1hO88427 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1hO88427 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1hO88427 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms