Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cdh16O88338 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cdh16O88338 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh16O88338 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh16O88338 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh16O88338 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.08■□□□□ 0.65
Cdh16O88338 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cdh16O88338 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cdh16O88338 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.08■□□□□ 0.64
Cdh16O88338 Gm43566-201ENSMUST00000196851 808 ntBASIC19.08■□□□□ 0.64
Cdh16O88338 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cdh16O88338 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh16O88338 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh16O88338 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cdh16O88338 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh16O88338 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.07■□□□□ 0.64
Cdh16O88338 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cdh16O88338 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cdh16O88338 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cdh16O88338 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.07■□□□□ 0.64
Cdh16O88338 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh16O88338 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh16O88338 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.06■□□□□ 0.64
Cdh16O88338 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh16O88338 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh16O88338 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.06■□□□□ 0.64
Cdh16O88338 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh16O88338 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh16O88338 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh16O88338 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh16O88338 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.05■□□□□ 0.64
Cdh16O88338 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.05■□□□□ 0.64
Cdh16O88338 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cdh16O88338 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdh16O88338 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Grk6-206ENSMUST00000224995 2971 ntBASIC19.04■□□□□ 0.64
Cdh16O88338 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdh16O88338 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cdh16O88338 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdh16O88338 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdh16O88338 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cdh16O88338 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdh16O88338 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdh16O88338 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms