Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
Pfdn2O70591 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfdn2O70591 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.18■□□□□ 0.18
Pfdn2O70591 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pfdn2O70591 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Pfdn2O70591 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pfdn2O70591 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.17■□□□□ 0.18
Pfdn2O70591 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pfdn2O70591 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pfdn2O70591 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pfdn2O70591 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pfdn2O70591 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.15■□□□□ 0.18
Pfdn2O70591 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pfdn2O70591 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pfdn2O70591 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pfdn2O70591 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Pfdn2O70591 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Pfdn2O70591 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pfdn2O70591 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pfdn2O70591 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.13■□□□□ 0.17
Pfdn2O70591 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pfdn2O70591 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.13■□□□□ 0.17
Pfdn2O70591 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pfdn2O70591 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pfdn2O70591 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.13■□□□□ 0.17
Pfdn2O70591 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.12■□□□□ 0.17
Pfdn2O70591 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.12■□□□□ 0.17
Pfdn2O70591 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pfdn2O70591 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms