Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh12O55134 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.69■□□□□ 0.42
Pcdh12O55134 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdh12O55134 Mir6236-201ENSMUST00000184437 123 ntBASIC17.69■□□□□ 0.42
Pcdh12O55134 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Pcdh12O55134 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh12O55134 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh12O55134 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh12O55134 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Mir7075-201ENSMUST00000184187 82 ntBASIC17.68■□□□□ 0.42
Pcdh12O55134 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh12O55134 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh12O55134 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh12O55134 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh12O55134 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh12O55134 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.66■□□□□ 0.42
Pcdh12O55134 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.66■□□□□ 0.42
Pcdh12O55134 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh12O55134 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh12O55134 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh12O55134 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh12O55134 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh12O55134 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh12O55134 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh12O55134 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Pcdh12O55134 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdh12O55134 Gm6139-201ENSMUST00000079261 882 ntBASIC17.65■□□□□ 0.42
Pcdh12O55134 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh12O55134 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh12O55134 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh12O55134 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh12O55134 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh12O55134 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh12O55134 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh12O55134 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh12O55134 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh12O55134 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh12O55134 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh12O55134 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.63■□□□□ 0.41
Pcdh12O55134 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh12O55134 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms