Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
Rnf13O54965 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf13O54965 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rnf13O54965 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf13O54965 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf13O54965 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf13O54965 Golph3-205ENSMUST00000228671 2842 ntBASIC17.67■□□□□ 0.42
Rnf13O54965 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf13O54965 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf13O54965 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf13O54965 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf13O54965 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf13O54965 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf13O54965 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.65■□□□□ 0.42
Rnf13O54965 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf13O54965 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf13O54965 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf13O54965 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf13O54965 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.64■□□□□ 0.42
Rnf13O54965 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Rnf13O54965 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf13O54965 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf13O54965 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf13O54965 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf13O54965 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf13O54965 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf13O54965 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.63■□□□□ 0.41
Rnf13O54965 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf13O54965 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.62■□□□□ 0.41
Rnf13O54965 Gm43530-201ENSMUST00000195920 274 ntBASIC17.62■□□□□ 0.41
Rnf13O54965 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rnf13O54965 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.62■□□□□ 0.41
Rnf13O54965 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf13O54965 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf13O54965 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf13O54965 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf13O54965 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf13O54965 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.61■□□□□ 0.41
Rnf13O54965 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Rnf13O54965 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf13O54965 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf13O54965 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf13O54965 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf13O54965 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf13O54965 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf13O54965 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf13O54965 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf13O54965 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf13O54965 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms