Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ChkaO54804 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ChkaO54804 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ChkaO54804 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ChkaO54804 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ChkaO54804 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.73■□□□□ 0.75
ChkaO54804 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 AA386476-201ENSMUST00000098781 1665 ntBASIC19.72■□□□□ 0.75
ChkaO54804 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ChkaO54804 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
ChkaO54804 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.72■□□□□ 0.75
ChkaO54804 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ChkaO54804 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
ChkaO54804 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.71■□□□□ 0.75
ChkaO54804 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChkaO54804 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChkaO54804 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ChkaO54804 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkaO54804 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkaO54804 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ChkaO54804 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.7■□□□□ 0.74
ChkaO54804 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkaO54804 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkaO54804 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkaO54804 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ChkaO54804 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkaO54804 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ChkaO54804 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkaO54804 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.68■□□□□ 0.74
ChkaO54804 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
ChkaO54804 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.68■□□□□ 0.74
ChkaO54804 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.68■□□□□ 0.74
ChkaO54804 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.68■□□□□ 0.74
ChkaO54804 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkaO54804 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkaO54804 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkaO54804 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkaO54804 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ChkaO54804 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ChkaO54804 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.66■□□□□ 0.74
ChkaO54804 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.66■□□□□ 0.74
ChkaO54804 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.66■□□□□ 0.74
ChkaO54804 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChkaO54804 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.66■□□□□ 0.74
ChkaO54804 Golgb1-201ENSMUST00000023534 498 ntBASIC19.66■□□□□ 0.74
ChkaO54804 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChkaO54804 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkaO54804 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.65■□□□□ 0.74
ChkaO54804 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkaO54804 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ChkaO54804 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ChkaO54804 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
ChkaO54804 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.64■□□□□ 0.73
ChkaO54804 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChkaO54804 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ChkaO54804 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms