Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CrxO54751 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.32□□□□□ -0.12
CrxO54751 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.32□□□□□ -0.12
CrxO54751 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.32□□□□□ -0.12
CrxO54751 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CrxO54751 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.31□□□□□ -0.12
CrxO54751 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.31□□□□□ -0.12
CrxO54751 Gm11599-201ENSMUST00000118720 878 ntBASIC14.31□□□□□ -0.12
CrxO54751 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.31□□□□□ -0.12
CrxO54751 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.31□□□□□ -0.12
CrxO54751 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CrxO54751 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CrxO54751 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.3□□□□□ -0.12
CrxO54751 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CrxO54751 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CrxO54751 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CrxO54751 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CrxO54751 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CrxO54751 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CrxO54751 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CrxO54751 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CrxO54751 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CrxO54751 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CrxO54751 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CrxO54751 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CrxO54751 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.28□□□□□ -0.12
CrxO54751 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.28□□□□□ -0.12
CrxO54751 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CrxO54751 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CrxO54751 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CrxO54751 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CrxO54751 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CrxO54751 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CrxO54751 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CrxO54751 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CrxO54751 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms