Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.44■□□□□ 0.38
Lsm2O35900 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lsm2O35900 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm2O35900 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Lsm2O35900 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Lsm2O35900 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.43■□□□□ 0.38
Lsm2O35900 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lsm2O35900 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm2O35900 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lsm2O35900 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lsm2O35900 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.42■□□□□ 0.38
Lsm2O35900 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.42■□□□□ 0.38
Lsm2O35900 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.42■□□□□ 0.38
Lsm2O35900 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm2O35900 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.41■□□□□ 0.38
Lsm2O35900 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lsm2O35900 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.41■□□□□ 0.38
Lsm2O35900 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Gm45444-201ENSMUST00000211394 898 ntBASIC17.41■□□□□ 0.38
Lsm2O35900 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lsm2O35900 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Rarb-207ENSMUST00000225921 2756 ntBASIC17.41■□□□□ 0.38
Lsm2O35900 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lsm2O35900 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lsm2O35900 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.4■□□□□ 0.38
Lsm2O35900 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lsm2O35900 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lsm2O35900 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.39■□□□□ 0.37
Lsm2O35900 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lsm2O35900 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.39■□□□□ 0.37
Lsm2O35900 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.38■□□□□ 0.37
Lsm2O35900 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.38■□□□□ 0.37
Lsm2O35900 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.38■□□□□ 0.37
Lsm2O35900 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.38■□□□□ 0.37
Lsm2O35900 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm2O35900 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.38■□□□□ 0.37
Lsm2O35900 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm2O35900 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm2O35900 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.37■□□□□ 0.37
Lsm2O35900 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.37■□□□□ 0.37
Lsm2O35900 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm2O35900 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms