Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.99■□□□□ 0.47
Capn1O35350 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Capn1O35350 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Capn1O35350 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Capn1O35350 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.98■□□□□ 0.47
Capn1O35350 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Capn1O35350 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.98■□□□□ 0.47
Capn1O35350 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.98■□□□□ 0.47
Capn1O35350 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Capn1O35350 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.98■□□□□ 0.47
Capn1O35350 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Capn1O35350 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Capn1O35350 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Capn1O35350 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.97■□□□□ 0.47
Capn1O35350 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capn1O35350 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.97■□□□□ 0.47
Capn1O35350 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.96■□□□□ 0.47
Capn1O35350 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Capn1O35350 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Gm26571-201ENSMUST00000181399 666 ntBASIC17.96■□□□□ 0.47
Capn1O35350 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Capn1O35350 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Capn1O35350 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Capn1O35350 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Capn1O35350 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Capn1O35350 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Capn1O35350 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.95■□□□□ 0.46
Capn1O35350 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.95■□□□□ 0.46
Capn1O35350 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Capn1O35350 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capn1O35350 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.95■□□□□ 0.46
Capn1O35350 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Capn1O35350 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Capn1O35350 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.94■□□□□ 0.46
Capn1O35350 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.94■□□□□ 0.46
Capn1O35350 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.94■□□□□ 0.46
Capn1O35350 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.94■□□□□ 0.46
Capn1O35350 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capn1O35350 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capn1O35350 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.93■□□□□ 0.46
Capn1O35350 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.93■□□□□ 0.46
Capn1O35350 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.93■□□□□ 0.46
Capn1O35350 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Capn1O35350 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Capn1O35350 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms