Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Usp35M0QWN7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp35M0QWN7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp35M0QWN7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp35M0QWN7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp35M0QWN7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.86■□□□□ 0.93
Usp35M0QWN7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.86■□□□□ 0.93
Usp35M0QWN7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Usp35M0QWN7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.86■□□□□ 0.93
Usp35M0QWN7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp35M0QWN7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp35M0QWN7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Usp35M0QWN7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.83■□□□□ 0.93
Usp35M0QWN7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Usp35M0QWN7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp35M0QWN7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp35M0QWN7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp35M0QWN7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp35M0QWN7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms