Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.04■□□□□ 0.8
Pcdh9F8VPK8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh9F8VPK8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh9F8VPK8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdh9F8VPK8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh9F8VPK8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdh9F8VPK8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdh9F8VPK8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh9F8VPK8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20■□□□□ 0.79
Pcdh9F8VPK8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh9F8VPK8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh9F8VPK8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh9F8VPK8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh9F8VPK8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh9F8VPK8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh9F8VPK8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh9F8VPK8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh9F8VPK8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdh9F8VPK8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh9F8VPK8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms